Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPF1Q9NWY4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HPF1Q9NWY4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.03■□□□□ 0.32
HPF1Q9NWY4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPF1Q9NWY4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.03■□□□□ 0.32
HPF1Q9NWY4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HPF1Q9NWY4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HPF1Q9NWY4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.03■□□□□ 0.32
HPF1Q9NWY4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPF1Q9NWY4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HPF1Q9NWY4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HPF1Q9NWY4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HPF1Q9NWY4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
HPF1Q9NWY4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 AL136038.4-201ENST00000603606 1261 ntBASIC17.02■□□□□ 0.32
HPF1Q9NWY4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HPF1Q9NWY4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HPF1Q9NWY4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.02■□□□□ 0.31
HPF1Q9NWY4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HPF1Q9NWY4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
HPF1Q9NWY4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HPF1Q9NWY4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.02■□□□□ 0.31
HPF1Q9NWY4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
HPF1Q9NWY4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
HPF1Q9NWY4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
HPF1Q9NWY4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HPF1Q9NWY4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HPF1Q9NWY4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HPF1Q9NWY4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HPF1Q9NWY4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
HPF1Q9NWY4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 AP000593.1-201ENST00000393668 712 ntBASIC17.01■□□□□ 0.31
HPF1Q9NWY4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 AC004408.2-201ENST00000623613 2777 ntBASIC17.01■□□□□ 0.31
HPF1Q9NWY4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HPF1Q9NWY4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HPF1Q9NWY4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17■□□□□ 0.31
HPF1Q9NWY4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17■□□□□ 0.31
HPF1Q9NWY4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17■□□□□ 0.31
HPF1Q9NWY4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HPF1Q9NWY4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HPF1Q9NWY4 AC020916.1-201ENST00000587762 1774 ntBASIC17■□□□□ 0.31
HPF1Q9NWY4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HPF1Q9NWY4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17■□□□□ 0.31
HPF1Q9NWY4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17■□□□□ 0.31
HPF1Q9NWY4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17■□□□□ 0.31
HPF1Q9NWY4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HPF1Q9NWY4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms