Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 AC124067.4-201ENST00000519691 2379 ntBASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2LQ9NUG4 HTR7P1-202ENST00000624664 4411 ntBASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 AC120498.8-201ENST00000614275 531 ntBASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2LQ9NUG4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CCM2LQ9NUG4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCM2LQ9NUG4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCM2LQ9NUG4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CCM2LQ9NUG4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CCM2LQ9NUG4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 AL049597.2-201ENST00000565575 961 ntBASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.45■□□□□ 0.38
CCM2LQ9NUG4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms