Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.05■□□□□ 0.32
POLE3Q9NRF9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLE3Q9NRF9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.05■□□□□ 0.32
POLE3Q9NRF9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLE3Q9NRF9 AC009102.3-201ENST00000623118 1491 ntBASIC17.05■□□□□ 0.32
POLE3Q9NRF9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLE3Q9NRF9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 GMCL1P1-201ENST00000463439 1581 ntBASIC17.04■□□□□ 0.32
POLE3Q9NRF9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 AC104390.1-201ENST00000555663 520 ntBASIC17.04■□□□□ 0.32
POLE3Q9NRF9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 AC112497.1-201ENST00000624824 639 ntBASIC17.04■□□□□ 0.32
POLE3Q9NRF9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
POLE3Q9NRF9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 AC093677.2-201ENST00000600169 1863 ntBASIC17.03■□□□□ 0.32
POLE3Q9NRF9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.03■□□□□ 0.32
POLE3Q9NRF9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 AC010947.1-201ENST00000623454 693 ntBASIC17.03■□□□□ 0.32
POLE3Q9NRF9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.03■□□□□ 0.32
POLE3Q9NRF9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 CYP2D8P-201ENST00000433633 1490 ntBASIC17.02■□□□□ 0.32
POLE3Q9NRF9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 HMGA1P5-201ENST00000412453 271 ntBASIC17.02■□□□□ 0.32
POLE3Q9NRF9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
POLE3Q9NRF9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms