Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 SPDYE13P-201ENST00000445314 798 ntBASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 AC112777.1-201ENST00000540175 1423 ntBASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARHGEF4Q9NR80 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ARHGEF4Q9NR80 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 AL645929.1-201ENST00000420084 975 ntBASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 AC034236.2-201ENST00000606662 1610 ntBASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARHGEF4Q9NR80 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 AC112497.1-201ENST00000624824 639 ntBASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARHGEF4Q9NR80 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF4Q9NR80 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.18■□□□□ 0.66
ARHGEF4Q9NR80 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.18■□□□□ 0.66
ARHGEF4Q9NR80 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ARHGEF4Q9NR80 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.18■□□□□ 0.66
ARHGEF4Q9NR80 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.18■□□□□ 0.66
ARHGEF4Q9NR80 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.18■□□□□ 0.66
ARHGEF4Q9NR80 DUSP5P1-201ENST00000441325 1139 ntBASIC19.18■□□□□ 0.66
ARHGEF4Q9NR80 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.18■□□□□ 0.66
ARHGEF4Q9NR80 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.18■□□□□ 0.66
ARHGEF4Q9NR80 SEC1P-202ENST00000473944 940 ntBASIC19.18■□□□□ 0.66
ARHGEF4Q9NR80 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms