Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HMG20AQ9NP66 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 FEM1AP3-201ENST00000403722 1741 ntBASIC16.68■□□□□ 0.26
HMG20AQ9NP66 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.68■□□□□ 0.26
HMG20AQ9NP66 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 AC092118.2-201ENST00000613495 667 ntBASIC16.68■□□□□ 0.26
HMG20AQ9NP66 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMG20AQ9NP66 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 AL390719.1-204ENST00000412397 1219 ntBASIC16.67■□□□□ 0.26
HMG20AQ9NP66 DUSP5P2-201ENST00000426873 1033 ntBASIC16.67■□□□□ 0.26
HMG20AQ9NP66 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMG20AQ9NP66 AL023806.1-201ENST00000603994 1649 ntBASIC16.67■□□□□ 0.26
HMG20AQ9NP66 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMG20AQ9NP66 SLC29A4P1-201ENST00000398760 971 ntBASIC16.66■□□□□ 0.26
HMG20AQ9NP66 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms