Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CD248Q9HCU0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.27■□□□□ 0.67
CD248Q9HCU0 AC008894.3-201ENST00000624324 3103 ntBASIC19.27■□□□□ 0.67
CD248Q9HCU0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CD248Q9HCU0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CD248Q9HCU0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD248Q9HCU0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.26■□□□□ 0.67
CD248Q9HCU0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD248Q9HCU0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CD248Q9HCU0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.26■□□□□ 0.67
CD248Q9HCU0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CD248Q9HCU0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CD248Q9HCU0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD248Q9HCU0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD248Q9HCU0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD248Q9HCU0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.26■□□□□ 0.67
CD248Q9HCU0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.26■□□□□ 0.67
CD248Q9HCU0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.26■□□□□ 0.67
CD248Q9HCU0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.26■□□□□ 0.67
CD248Q9HCU0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD248Q9HCU0 NEK4P2-201ENST00000580004 1012 ntBASIC19.26■□□□□ 0.67
CD248Q9HCU0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.26■□□□□ 0.67
CD248Q9HCU0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD248Q9HCU0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CD248Q9HCU0 AC140113.3-201ENST00000605663 199 ntBASIC19.26■□□□□ 0.67
CD248Q9HCU0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD248Q9HCU0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.26■□□□□ 0.67
CD248Q9HCU0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD248Q9HCU0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CD248Q9HCU0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD248Q9HCU0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD248Q9HCU0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CD248Q9HCU0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CD248Q9HCU0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CD248Q9HCU0 AC005332.1-201ENST00000577698 1310 ntBASIC19.25■□□□□ 0.67
CD248Q9HCU0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD248Q9HCU0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD248Q9HCU0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CD248Q9HCU0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD248Q9HCU0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.25■□□□□ 0.67
CD248Q9HCU0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD248Q9HCU0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD248Q9HCU0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD248Q9HCU0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD248Q9HCU0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.25■□□□□ 0.67
CD248Q9HCU0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD248Q9HCU0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD248Q9HCU0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.25■□□□□ 0.67
CD248Q9HCU0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.25■□□□□ 0.67
CD248Q9HCU0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.25■□□□□ 0.67
CD248Q9HCU0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.25■□□□□ 0.67
CD248Q9HCU0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.25■□□□□ 0.67
CD248Q9HCU0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.25■□□□□ 0.67
CD248Q9HCU0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.25■□□□□ 0.67
CD248Q9HCU0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.25■□□□□ 0.67
CD248Q9HCU0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.25■□□□□ 0.67
CD248Q9HCU0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD248Q9HCU0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD248Q9HCU0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.25■□□□□ 0.67
CD248Q9HCU0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.24■□□□□ 0.67
CD248Q9HCU0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD248Q9HCU0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD248Q9HCU0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD248Q9HCU0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD248Q9HCU0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD248Q9HCU0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD248Q9HCU0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD248Q9HCU0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD248Q9HCU0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.24■□□□□ 0.67
CD248Q9HCU0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.24■□□□□ 0.67
CD248Q9HCU0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.24■□□□□ 0.67
CD248Q9HCU0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CD248Q9HCU0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD248Q9HCU0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CD248Q9HCU0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD248Q9HCU0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CD248Q9HCU0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD248Q9HCU0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD248Q9HCU0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD248Q9HCU0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.23■□□□□ 0.67
CD248Q9HCU0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CD248Q9HCU0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CD248Q9HCU0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD248Q9HCU0 ZNF815P-204ENST00000434898 1737 ntBASIC19.23■□□□□ 0.67
CD248Q9HCU0 IER3-202ENST00000376377 1350 ntBASIC19.23■□□□□ 0.67
CD248Q9HCU0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.23■□□□□ 0.67
CD248Q9HCU0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CD248Q9HCU0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CD248Q9HCU0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.23■□□□□ 0.67
CD248Q9HCU0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD248Q9HCU0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD248Q9HCU0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.23■□□□□ 0.67
CD248Q9HCU0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD248Q9HCU0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.23■□□□□ 0.67
CD248Q9HCU0 GCSHP2-201ENST00000560971 527 ntBASIC19.23■□□□□ 0.67
CD248Q9HCU0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD248Q9HCU0 AC083849.1-201ENST00000615227 514 ntBASIC19.23■□□□□ 0.67
CD248Q9HCU0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD248Q9HCU0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.23■□□□□ 0.67
CD248Q9HCU0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms