Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIN28AQ9H9Z2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.67■□□□□ 0.42
LIN28AQ9H9Z2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.67■□□□□ 0.42
LIN28AQ9H9Z2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.67■□□□□ 0.42
LIN28AQ9H9Z2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
LIN28AQ9H9Z2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIN28AQ9H9Z2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.67■□□□□ 0.42
LIN28AQ9H9Z2 TEX21P-204ENST00000641479 1693 ntBASIC17.67■□□□□ 0.42
LIN28AQ9H9Z2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIN28AQ9H9Z2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIN28AQ9H9Z2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIN28AQ9H9Z2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LIN28AQ9H9Z2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.67■□□□□ 0.42
LIN28AQ9H9Z2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIN28AQ9H9Z2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 Z98044.1-201ENST00000632503 1764 ntBASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 KRT18P22-201ENST00000402024 1347 ntBASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LIN28AQ9H9Z2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LIN28AQ9H9Z2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LIN28AQ9H9Z2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LIN28AQ9H9Z2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIN28AQ9H9Z2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms