Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
LRRC40Q9H9A6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC40Q9H9A6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
LRRC40Q9H9A6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.64■□□□□ 0.58
LRRC40Q9H9A6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
LRRC40Q9H9A6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC40Q9H9A6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 MIR3180-4-201ENST00000582223 153 ntBASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 FAM87A-204ENST00000613235 858 ntBASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 LETM1P2-201ENST00000597330 2178 ntBASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC40Q9H9A6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 HMGA1P5-201ENST00000412453 271 ntBASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 AC066615.1-201ENST00000640911 628 ntBASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 AC068880.1-201ENST00000507289 2297 ntBASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC40Q9H9A6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 HTR7P1-202ENST00000624664 4411 ntBASIC18.62■□□□□ 0.57
LRRC40Q9H9A6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC40Q9H9A6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms