Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ATXN3LQ9H3M9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATXN3LQ9H3M9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.25■□□□□ 0.67
ATXN3LQ9H3M9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.25■□□□□ 0.67
ATXN3LQ9H3M9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
ATXN3LQ9H3M9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 AC093503.3-201ENST00000624917 2352 ntBASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 AC012615.1-201ENST00000565797 1299 ntBASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.24■□□□□ 0.67
ATXN3LQ9H3M9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 AC104819.1-201ENST00000504587 486 ntBASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 AL121772.3-201ENST00000610840 674 ntBASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ATXN3LQ9H3M9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 FOSL1P1-201ENST00000511041 816 ntBASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 GUSBP12-201ENST00000513727 720 ntBASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 IFNL4P1-201ENST00000607083 540 ntBASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 AL732292.2-201ENST00000609649 430 ntBASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 AC124864.1-201ENST00000623408 392 ntBASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATXN3LQ9H3M9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 AL163051.1-201ENST00000569214 1512 ntBASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 AP000593.1-201ENST00000393668 712 ntBASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 TSPY19P-201ENST00000418461 509 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms