Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3BQ9H321 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VCX3BQ9H321 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3BQ9H321 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.49■□□□□ 0.39
VCX3BQ9H321 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3BQ9H321 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
VCX3BQ9H321 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3BQ9H321 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3BQ9H321 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3BQ9H321 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
VCX3BQ9H321 AC103702.1-201ENST00000548801 2630 ntBASIC17.49■□□□□ 0.39
VCX3BQ9H321 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VCX3BQ9H321 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.49■□□□□ 0.39
VCX3BQ9H321 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.49■□□□□ 0.39
VCX3BQ9H321 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.49■□□□□ 0.39
VCX3BQ9H321 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
VCX3BQ9H321 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3BQ9H321 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3BQ9H321 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3BQ9H321 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3BQ9H321 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.49■□□□□ 0.39
VCX3BQ9H321 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VCX3BQ9H321 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VCX3BQ9H321 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VCX3BQ9H321 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.48■□□□□ 0.39
VCX3BQ9H321 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.48■□□□□ 0.39
VCX3BQ9H321 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.48■□□□□ 0.39
VCX3BQ9H321 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3BQ9H321 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.48■□□□□ 0.39
VCX3BQ9H321 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
VCX3BQ9H321 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3BQ9H321 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3BQ9H321 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3BQ9H321 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.48■□□□□ 0.39
VCX3BQ9H321 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.48■□□□□ 0.39
VCX3BQ9H321 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.48■□□□□ 0.39
VCX3BQ9H321 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3BQ9H321 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
VCX3BQ9H321 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3BQ9H321 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3BQ9H321 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3BQ9H321 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
VCX3BQ9H321 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3BQ9H321 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3BQ9H321 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
VCX3BQ9H321 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3BQ9H321 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3BQ9H321 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.48■□□□□ 0.39
VCX3BQ9H321 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VCX3BQ9H321 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VCX3BQ9H321 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.47■□□□□ 0.39
VCX3BQ9H321 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.46■□□□□ 0.39
VCX3BQ9H321 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCX3BQ9H321 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VCX3BQ9H321 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VCX3BQ9H321 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.46■□□□□ 0.39
VCX3BQ9H321 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VCX3BQ9H321 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCX3BQ9H321 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCX3BQ9H321 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VCX3BQ9H321 FLJ16779-201ENST00000612722 7638 ntBASIC17.46■□□□□ 0.39
VCX3BQ9H321 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms