Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.04■■□□□ 1.28
CNTNAP4Q9C0A0 HMGN1P19-201ENST00000436976 333 ntBASIC23.04■■□□□ 1.28
CNTNAP4Q9C0A0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC23.04■■□□□ 1.28
CNTNAP4Q9C0A0 AC105339.3-201ENST00000560043 636 ntBASIC23.04■■□□□ 1.28
CNTNAP4Q9C0A0 NKAPP1-205ENST00000585790 367 ntBASIC23.04■■□□□ 1.28
CNTNAP4Q9C0A0 MTDHP4-201ENST00000600287 670 ntBASIC23.04■■□□□ 1.28
CNTNAP4Q9C0A0 AC099343.3-201ENST00000605834 2503 ntBASIC23.04■■□□□ 1.28
CNTNAP4Q9C0A0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.04■■□□□ 1.28
CNTNAP4Q9C0A0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 UNC93B6-202ENST00000528242 690 ntBASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNTNAP4Q9C0A0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 LINC01126-201ENST00000623515 1646 ntBASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 INIP-202ENST00000374236 874 ntTSL 2 BASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 PMS2P2-201ENST00000425039 1128 ntBASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 DNAJB3-201ENST00000446806 729 ntBASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 HS6ST1P1-201ENST00000481504 1234 ntBASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 AP000867.4-201ENST00000641616 219 ntBASIC23.02■■□□□ 1.28
CNTNAP4Q9C0A0 AP002414.3-201ENST00000589352 1468 ntBASIC23.02■■□□□ 1.27
CNTNAP4Q9C0A0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 LAGE3P1-201ENST00000425356 484 ntBASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC23.01■■□□□ 1.27
CNTNAP4Q9C0A0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 AL161938.1-201ENST00000569833 2180 ntBASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 AC004832.2-201ENST00000426397 482 ntBASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 AC112698.1-201ENST00000510299 916 ntBASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
CNTNAP4Q9C0A0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
CNTNAP4Q9C0A0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNTNAP4Q9C0A0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNTNAP4Q9C0A0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.99■■□□□ 1.27
CNTNAP4Q9C0A0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CNTNAP4Q9C0A0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNTNAP4Q9C0A0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CNTNAP4Q9C0A0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms