Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM2Q9C040 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM2Q9C040 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM2Q9C040 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM2Q9C040 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM2Q9C040 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM2Q9C040 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 FITM1-202ENST00000559294 800 ntBASIC16.9■□□□□ 0.3
TRIM2Q9C040 MIR4674-201ENST00000582457 87 ntBASIC16.9■□□□□ 0.3
TRIM2Q9C040 AP000525.1-201ENST00000608286 694 ntBASIC16.9■□□□□ 0.3
TRIM2Q9C040 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM2Q9C040 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM2Q9C040 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM2Q9C040 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM2Q9C040 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM2Q9C040 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM2Q9C040 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM2Q9C040 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 KRT8P7-201ENST00000533003 1432 ntBASIC16.89■□□□□ 0.29
TRIM2Q9C040 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM2Q9C040 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM2Q9C040 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM2Q9C040 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM2Q9C040 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM2Q9C040 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.89■□□□□ 0.29
TRIM2Q9C040 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 KRT18P21-201ENST00000515767 1272 ntBASIC16.89■□□□□ 0.29
TRIM2Q9C040 AP003041.3-201ENST00000527151 707 ntBASIC16.89■□□□□ 0.29
TRIM2Q9C040 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM2Q9C040 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 AC116562.4-202ENST00000641738 218 ntBASIC16.89■□□□□ 0.29
TRIM2Q9C040 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM2Q9C040 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM2Q9C040 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM2Q9C040 AC135776.1-201ENST00000319817 2481 ntBASIC16.89■□□□□ 0.29
TRIM2Q9C040 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 AC036111.1-201ENST00000533973 1582 ntBASIC16.89■□□□□ 0.29
TRIM2Q9C040 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM2Q9C040 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
TRIM2Q9C040 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM2Q9C040 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM2Q9C040 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM2Q9C040 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM2Q9C040 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM2Q9C040 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM2Q9C040 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM2Q9C040 C2orf69P3-201ENST00000565542 1120 ntBASIC16.88■□□□□ 0.29
TRIM2Q9C040 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
TRIM2Q9C040 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM2Q9C040 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM2Q9C040 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM2Q9C040 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM2Q9C040 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 AC093677.2-201ENST00000600169 1863 ntBASIC16.88■□□□□ 0.29
TRIM2Q9C040 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM2Q9C040 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM2Q9C040 HOXB1-202ENST00000577092 1414 ntBASIC16.87■□□□□ 0.29
TRIM2Q9C040 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms