Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC245595.2-202ENST00000611488 1197 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 AC239859.5-201ENST00000614100 1232 ntBASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 NBDY-201ENST00000374922 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC11.43□□□□□ -0.58
KRTAP3-3Q9BYR6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 Y_RNA.70-201ENST00000362886 110 ntBASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 ALKAL2-203ENST00000401503 748 ntTSL 2 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 PTGES3P2-201ENST00000407942 482 ntBASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AL391822.1-201ENST00000452580 562 ntBASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 PRDX4P1-201ENST00000507189 574 ntBASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AC024589.1-201ENST00000512207 263 ntBASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 MRPS36P3-201ENST00000519284 130 ntBASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AC084851.2-201ENST00000530377 364 ntBASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AC005225.2-201ENST00000555011 629 ntTSL 2 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AC138907.7-202ENST00000565347 540 ntTSL 4 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AC099518.5-201ENST00000567236 1137 ntTSL 3 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AC141257.2-201ENST00000569199 540 ntTSL 5 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 RBM22P13-201ENST00000569805 1244 ntBASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 ZNF506-206ENST00000587452 575 ntTSL 4 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AC013553.2-201ENST00000604244 589 ntBASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 SMARCE1P7-201ENST00000605515 485 ntBASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AC026979.3-201ENST00000607315 403 ntBASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 ANKRD20A2-203ENST00000611747 520 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 ANKRD20A4-203ENST00000615302 520 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 AL512427.1-201ENST00000618593 349 ntBASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 ANKRD20A8P-203ENST00000641373 517 ntBASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
KRTAP3-3Q9BYR6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 SLC25A52-201ENST00000269205 1319 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 CCDC144NL-AS1-216ENST00000582583 1670 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AL606530.1-201ENST00000441783 1250 ntBASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 LINC02006-203ENST00000493214 812 ntTSL 2 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 PHBP8-201ENST00000493810 725 ntBASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 CCNHP1-201ENST00000513311 678 ntBASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AP003499.1-201ENST00000527217 574 ntBASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AC091304.4-201ENST00000565703 620 ntBASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC11.41□□□□□ -0.58
KRTAP3-3Q9BYR6 AC025588.2-201ENST00000604851 466 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms