Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 AL391807.1-203ENST00000604392 2365 ntBASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 AL671277.2-201ENST00000458060 996 ntBASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 AC092597.1-201ENST00000487352 616 ntBASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 KRT18P35-201ENST00000510488 1269 ntBASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 AC087388.1-201ENST00000571370 1112 ntBASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 AC020763.4-201ENST00000623414 4170 ntBASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCM2Q9BSQ5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 ARMC10P1-201ENST00000313754 855 ntBASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 AL136038.4-201ENST00000603606 1261 ntBASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 AL445228.2-201ENST00000605589 952 ntBASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 GMCL1P1-201ENST00000463439 1581 ntBASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.03■□□□□ 0.48
CCM2Q9BSQ5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 HLA-F-220ENST00000434407 884 ntBASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 LINC01311-201ENST00000565162 1445 ntBASIC18.02■□□□□ 0.48
CCM2Q9BSQ5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms