Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
VGLL1Q99990 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
VGLL1Q99990 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.94□□□□□ -0.18
VGLL1Q99990 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 AC133681.1-201ENST00000465482 601 ntBASIC13.94□□□□□ -0.18
VGLL1Q99990 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
VGLL1Q99990 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.94□□□□□ -0.18
VGLL1Q99990 MYLKP1-201ENST00000509077 1580 ntBASIC13.94□□□□□ -0.18
VGLL1Q99990 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.94□□□□□ -0.18
VGLL1Q99990 PRORSD1P-202ENST00000563365 2154 ntBASIC13.94□□□□□ -0.18
VGLL1Q99990 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
VGLL1Q99990 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.94□□□□□ -0.18
VGLL1Q99990 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VGLL1Q99990 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.94□□□□□ -0.18
VGLL1Q99990 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.93□□□□□ -0.18
VGLL1Q99990 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.93□□□□□ -0.18
VGLL1Q99990 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.93□□□□□ -0.18
VGLL1Q99990 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.93□□□□□ -0.18
VGLL1Q99990 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.93□□□□□ -0.18
VGLL1Q99990 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VGLL1Q99990 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.93□□□□□ -0.18
VGLL1Q99990 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.93□□□□□ -0.18
VGLL1Q99990 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VGLL1Q99990 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VGLL1Q99990 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VGLL1Q99990 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 AC138028.4-201ENST00000564984 1845 ntBASIC13.93□□□□□ -0.18
VGLL1Q99990 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 AL139384.1-201ENST00000612143 3047 ntBASIC13.93□□□□□ -0.18
VGLL1Q99990 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
VGLL1Q99990 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.93□□□□□ -0.18
VGLL1Q99990 ESRRAP1-201ENST00000400596 1257 ntBASIC13.93□□□□□ -0.18
VGLL1Q99990 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
VGLL1Q99990 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.93□□□□□ -0.18
VGLL1Q99990 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.93□□□□□ -0.18
VGLL1Q99990 AC139713.2-201ENST00000641328 2723 ntBASIC13.93□□□□□ -0.18
VGLL1Q99990 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.93□□□□□ -0.18
VGLL1Q99990 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VGLL1Q99990 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.93□□□□□ -0.18
VGLL1Q99990 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VGLL1Q99990 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VGLL1Q99990 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VGLL1Q99990 HTR7P1-201ENST00000538670 1336 ntBASIC13.92□□□□□ -0.18
VGLL1Q99990 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VGLL1Q99990 AC011270.2-201ENST00000624293 2550 ntBASIC13.92□□□□□ -0.18
VGLL1Q99990 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.92□□□□□ -0.18
VGLL1Q99990 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.92□□□□□ -0.18
VGLL1Q99990 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VGLL1Q99990 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VGLL1Q99990 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VGLL1Q99990 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VGLL1Q99990 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VGLL1Q99990 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VGLL1Q99990 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VGLL1Q99990 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VGLL1Q99990 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.92□□□□□ -0.18
VGLL1Q99990 KSR1P1-201ENST00000446298 240 ntBASIC13.92□□□□□ -0.18
VGLL1Q99990 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.92□□□□□ -0.18
VGLL1Q99990 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.92□□□□□ -0.18
VGLL1Q99990 RN7SL471P-201ENST00000580476 299 ntBASIC13.92□□□□□ -0.18
VGLL1Q99990 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VGLL1Q99990 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.92□□□□□ -0.18
VGLL1Q99990 AC011298.2-201ENST00000617989 482 ntBASIC13.92□□□□□ -0.18
VGLL1Q99990 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.92□□□□□ -0.18
VGLL1Q99990 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.92□□□□□ -0.18
VGLL1Q99990 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.92□□□□□ -0.18
VGLL1Q99990 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VGLL1Q99990 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms