Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
ARID3AQ99856 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
ARID3AQ99856 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 GCSHP5-201ENST00000443090 522 ntBASIC20.84■□□□□ 0.93
ARID3AQ99856 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.84■□□□□ 0.93
ARID3AQ99856 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.84■□□□□ 0.93
ARID3AQ99856 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.84■□□□□ 0.93
ARID3AQ99856 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.84■□□□□ 0.93
ARID3AQ99856 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.84■□□□□ 0.93
ARID3AQ99856 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
ARID3AQ99856 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARID3AQ99856 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ARID3AQ99856 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ARID3AQ99856 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
ARID3AQ99856 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
ARID3AQ99856 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ARID3AQ99856 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ARID3AQ99856 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ARID3AQ99856 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ARID3AQ99856 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ARID3AQ99856 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ARID3AQ99856 AL158047.1-201ENST00000445918 881 ntBASIC20.83■□□□□ 0.93
ARID3AQ99856 KRT16P5-201ENST00000455284 522 ntBASIC20.83■□□□□ 0.93
ARID3AQ99856 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.83■□□□□ 0.93
ARID3AQ99856 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
ARID3AQ99856 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.83■□□□□ 0.93
ARID3AQ99856 AC004264.1-201ENST00000608354 794 ntBASIC20.83■□□□□ 0.93
ARID3AQ99856 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.83■□□□□ 0.93
ARID3AQ99856 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ARID3AQ99856 ZNF815P-204ENST00000434898 1737 ntBASIC20.83■□□□□ 0.92
ARID3AQ99856 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ARID3AQ99856 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC20.83■□□□□ 0.92
ARID3AQ99856 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ARID3AQ99856 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.83■□□□□ 0.92
ARID3AQ99856 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ARID3AQ99856 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
ARID3AQ99856 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.83■□□□□ 0.92
ARID3AQ99856 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
ARID3AQ99856 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.82■□□□□ 0.92
ARID3AQ99856 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.82■□□□□ 0.92
ARID3AQ99856 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ARID3AQ99856 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ARID3AQ99856 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.82■□□□□ 0.92
ARID3AQ99856 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.82■□□□□ 0.92
ARID3AQ99856 AC142381.4-202ENST00000563973 229 ntBASIC20.82■□□□□ 0.92
ARID3AQ99856 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.82■□□□□ 0.92
ARID3AQ99856 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
ARID3AQ99856 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.82■□□□□ 0.92
ARID3AQ99856 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.82■□□□□ 0.92
ARID3AQ99856 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
ARID3AQ99856 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
ARID3AQ99856 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.82■□□□□ 0.92
ARID3AQ99856 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARID3AQ99856 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ARID3AQ99856 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
ARID3AQ99856 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.81■□□□□ 0.92
ARID3AQ99856 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.81■□□□□ 0.92
ARID3AQ99856 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.81■□□□□ 0.92
ARID3AQ99856 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.81■□□□□ 0.92
ARID3AQ99856 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.81■□□□□ 0.92
ARID3AQ99856 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ARID3AQ99856 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.81■□□□□ 0.92
ARID3AQ99856 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARID3AQ99856 FAM197Y4-202ENST00000622692 608 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms