Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF2Q99805 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF2Q99805 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF2Q99805 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF2Q99805 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF2Q99805 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF2Q99805 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.03■□□□□ 0.32
TM9SF2Q99805 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.03■□□□□ 0.32
TM9SF2Q99805 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.03■□□□□ 0.32
TM9SF2Q99805 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TM9SF2Q99805 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF2Q99805 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF2Q99805 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF2Q99805 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.03■□□□□ 0.32
TM9SF2Q99805 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.03■□□□□ 0.32
TM9SF2Q99805 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.03■□□□□ 0.32
TM9SF2Q99805 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TM9SF2Q99805 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TM9SF2Q99805 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TM9SF2Q99805 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF2Q99805 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.02■□□□□ 0.32
TM9SF2Q99805 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF2Q99805 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF2Q99805 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TM9SF2Q99805 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF2Q99805 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF2Q99805 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TM9SF2Q99805 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF2Q99805 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TM9SF2Q99805 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF2Q99805 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF2Q99805 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.02■□□□□ 0.32
TM9SF2Q99805 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF2Q99805 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF2Q99805 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TM9SF2Q99805 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
TM9SF2Q99805 TSPY21P-201ENST00000433481 731 ntBASIC17.02■□□□□ 0.32
TM9SF2Q99805 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
TM9SF2Q99805 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TM9SF2Q99805 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
TM9SF2Q99805 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF2Q99805 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TM9SF2Q99805 SDHAP1-207ENST00000440850 2000 ntBASIC17.02■□□□□ 0.32
TM9SF2Q99805 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.02■□□□□ 0.31
TM9SF2Q99805 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TM9SF2Q99805 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TM9SF2Q99805 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TM9SF2Q99805 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TM9SF2Q99805 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TM9SF2Q99805 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 LINC01238-205ENST00000567549 1107 ntBASIC17.01■□□□□ 0.31
TM9SF2Q99805 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TM9SF2Q99805 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TM9SF2Q99805 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17■□□□□ 0.31
TM9SF2Q99805 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TM9SF2Q99805 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TM9SF2Q99805 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms