Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 SPDYE15P-201ENST00000424157 909 ntBASIC16.83■□□□□ 0.28
TIMP4Q99727 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.83■□□□□ 0.28
TIMP4Q99727 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP4Q99727 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.83■□□□□ 0.28
TIMP4Q99727 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP4Q99727 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
TIMP4Q99727 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.83■□□□□ 0.28
TIMP4Q99727 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP4Q99727 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TIMP4Q99727 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP4Q99727 HYMAI.1-201ENST00000620949 238 ntBASIC16.83■□□□□ 0.28
TIMP4Q99727 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TIMP4Q99727 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP4Q99727 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP4Q99727 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP4Q99727 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP4Q99727 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.83■□□□□ 0.28
TIMP4Q99727 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.82■□□□□ 0.28
TIMP4Q99727 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TIMP4Q99727 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TIMP4Q99727 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.82■□□□□ 0.28
TIMP4Q99727 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TIMP4Q99727 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TIMP4Q99727 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 AC034232.1-201ENST00000506026 1064 ntBASIC16.82■□□□□ 0.28
TIMP4Q99727 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.82■□□□□ 0.28
TIMP4Q99727 AC112497.1-201ENST00000624824 639 ntBASIC16.82■□□□□ 0.28
TIMP4Q99727 AP000550.4-202ENST00000639755 178 ntBASIC16.82■□□□□ 0.28
TIMP4Q99727 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TIMP4Q99727 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP4Q99727 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.81■□□□□ 0.28
TIMP4Q99727 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 LINC01311-201ENST00000565162 1445 ntBASIC16.81■□□□□ 0.28
TIMP4Q99727 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.81■□□□□ 0.28
TIMP4Q99727 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
TIMP4Q99727 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.81■□□□□ 0.28
TIMP4Q99727 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.81■□□□□ 0.28
TIMP4Q99727 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.81■□□□□ 0.28
TIMP4Q99727 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.81■□□□□ 0.28
TIMP4Q99727 RASA4DP-201ENST00000460726 1199 ntBASIC16.81■□□□□ 0.28
TIMP4Q99727 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.81■□□□□ 0.28
TIMP4Q99727 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.81■□□□□ 0.28
TIMP4Q99727 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TIMP4Q99727 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TIMP4Q99727 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TIMP4Q99727 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP4Q99727 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TIMP4Q99727 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TIMP4Q99727 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TIMP4Q99727 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP4Q99727 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP4Q99727 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TIMP4Q99727 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TIMP4Q99727 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP4Q99727 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TIMP4Q99727 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.8■□□□□ 0.28
TIMP4Q99727 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP4Q99727 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP4Q99727 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP4Q99727 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP4Q99727 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP4Q99727 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.8■□□□□ 0.28
TIMP4Q99727 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms