Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA3Q99618 MYLKP1-201ENST00000509077 1580 ntBASIC19.03■□□□□ 0.64
CDCA3Q99618 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CDCA3Q99618 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CDCA3Q99618 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA3Q99618 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA3Q99618 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.03■□□□□ 0.64
CDCA3Q99618 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA3Q99618 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA3Q99618 LAGE3P1-201ENST00000425356 484 ntBASIC19.03■□□□□ 0.64
CDCA3Q99618 AC004832.2-201ENST00000426397 482 ntBASIC19.03■□□□□ 0.64
CDCA3Q99618 HMGN1P19-201ENST00000436976 333 ntBASIC19.03■□□□□ 0.64
CDCA3Q99618 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.03■□□□□ 0.64
CDCA3Q99618 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.03■□□□□ 0.64
CDCA3Q99618 AC112482.1-201ENST00000492080 688 ntBASIC19.03■□□□□ 0.64
CDCA3Q99618 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.03■□□□□ 0.64
CDCA3Q99618 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.03■□□□□ 0.64
CDCA3Q99618 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.03■□□□□ 0.64
CDCA3Q99618 MTDHP4-201ENST00000600287 670 ntBASIC19.03■□□□□ 0.64
CDCA3Q99618 AL355385.1-201ENST00000606123 409 ntBASIC19.03■□□□□ 0.64
CDCA3Q99618 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CDCA3Q99618 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
CDCA3Q99618 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.03■□□□□ 0.64
CDCA3Q99618 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA3Q99618 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA3Q99618 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDCA3Q99618 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDCA3Q99618 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDCA3Q99618 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDCA3Q99618 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CDCA3Q99618 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDCA3Q99618 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CDCA3Q99618 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.02■□□□□ 0.64
CDCA3Q99618 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.02■□□□□ 0.64
CDCA3Q99618 UNC93B6-202ENST00000528242 690 ntBASIC19.02■□□□□ 0.64
CDCA3Q99618 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
CDCA3Q99618 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.02■□□□□ 0.64
CDCA3Q99618 AC002347.1-201ENST00000569543 541 ntBASIC19.02■□□□□ 0.64
CDCA3Q99618 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDCA3Q99618 NKAPP1-205ENST00000585790 367 ntBASIC19.02■□□□□ 0.64
CDCA3Q99618 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.02■□□□□ 0.64
CDCA3Q99618 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.02■□□□□ 0.64
CDCA3Q99618 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDCA3Q99618 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CDCA3Q99618 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDCA3Q99618 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDCA3Q99618 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDCA3Q99618 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDCA3Q99618 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.01■□□□□ 0.63
CDCA3Q99618 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDCA3Q99618 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDCA3Q99618 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CDCA3Q99618 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDCA3Q99618 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CDCA3Q99618 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDCA3Q99618 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.01■□□□□ 0.63
CDCA3Q99618 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDCA3Q99618 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDCA3Q99618 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.01■□□□□ 0.63
CDCA3Q99618 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.01■□□□□ 0.63
CDCA3Q99618 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.01■□□□□ 0.63
CDCA3Q99618 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.01■□□□□ 0.63
CDCA3Q99618 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.01■□□□□ 0.63
CDCA3Q99618 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.01■□□□□ 0.63
CDCA3Q99618 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDCA3Q99618 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.01■□□□□ 0.63
CDCA3Q99618 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDCA3Q99618 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CDCA3Q99618 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
CDCA3Q99618 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19■□□□□ 0.63
CDCA3Q99618 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CDCA3Q99618 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDCA3Q99618 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDCA3Q99618 COA5-202ENST00000409997 557 ntTSL 4 BASIC19■□□□□ 0.63
CDCA3Q99618 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19■□□□□ 0.63
CDCA3Q99618 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
CDCA3Q99618 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19■□□□□ 0.63
CDCA3Q99618 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
CDCA3Q99618 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19■□□□□ 0.63
CDCA3Q99618 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19■□□□□ 0.63
CDCA3Q99618 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDCA3Q99618 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 LINC00602-201ENST00000629776 2065 ntBASIC19■□□□□ 0.63
CDCA3Q99618 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19■□□□□ 0.63
CDCA3Q99618 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDCA3Q99618 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDCA3Q99618 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms