Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 BICD1-207ENST00000551848 1962 ntBASIC18.99■□□□□ 0.63
NUDCD1Q96RS6 AC012313.1-201ENST00000593393 3059 ntBASIC18.99■□□□□ 0.63
NUDCD1Q96RS6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
NUDCD1Q96RS6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 AC113347.1-201ENST00000413321 391 ntBASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 WWOX-216ENST00000569818 525 ntBASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 MTMR9LP-203ENST00000426597 1545 ntBASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 KRT8P45-201ENST00000414328 1447 ntBASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NUDCD1Q96RS6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 WIZP1-201ENST00000531444 2299 ntBASIC18.97■□□□□ 0.63
NUDCD1Q96RS6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 AC036111.1-201ENST00000533973 1582 ntBASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 AC093525.10-201ENST00000625130 1569 ntBASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUDCD1Q96RS6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 AC106820.2-201ENST00000563775 3264 ntBASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 MIR564-202ENST00000385049 94 ntBASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NUDCD1Q96RS6 AC010203.1-204ENST00000548782 407 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms