Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 LINC01126-201ENST00000623515 1646 ntBASIC15.25■□□□□ 0.03
GAFA1Q96PS6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.25■□□□□ 0.03
GAFA1Q96PS6 HYMAI.1-201ENST00000620949 238 ntBASIC15.25■□□□□ 0.03
GAFA1Q96PS6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.24■□□□□ 0.03
GAFA1Q96PS6 HLA-F-220ENST00000434407 884 ntBASIC15.24■□□□□ 0.03
GAFA1Q96PS6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 AC135776.1-201ENST00000319817 2481 ntBASIC15.24■□□□□ 0.03
GAFA1Q96PS6 LINC01311-201ENST00000565162 1445 ntBASIC15.24■□□□□ 0.03
GAFA1Q96PS6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GAFA1Q96PS6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 AC093677.2-201ENST00000600169 1863 ntBASIC15.23■□□□□ 0.03
GAFA1Q96PS6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 HBZP1-201ENST00000354915 429 ntBASIC15.23■□□□□ 0.03
GAFA1Q96PS6 AL671277.2-201ENST00000458060 996 ntBASIC15.23■□□□□ 0.03
GAFA1Q96PS6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.23■□□□□ 0.03
GAFA1Q96PS6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 BICD1-207ENST00000551848 1962 ntBASIC15.23■□□□□ 0.03
GAFA1Q96PS6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GAFA1Q96PS6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.22■□□□□ 0.03
GAFA1Q96PS6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms