Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 RPS2P1-201ENST00000434010 821 ntBASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 KRT18P3-201ENST00000451602 1288 ntBASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 OR7E14P-202ENST00000530490 1290 ntBASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 AC040169.1-201ENST00000565382 521 ntBASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 AL139424.1-201ENST00000607572 797 ntBASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 AC009154.2-201ENST00000621177 724 ntBASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
NECTIN4Q96NY8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 AL356309.3-201ENST00000624132 1934 ntBASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 SART3-203ENST00000546611 1184 ntBASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 AC010327.4-202ENST00000591484 748 ntBASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 AP001160.2-201ENST00000596071 487 ntBASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NECTIN4Q96NY8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 AC009102.3-201ENST00000623118 1491 ntBASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 HMGN1P19-201ENST00000436976 333 ntBASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 AC092910.1-201ENST00000482027 1129 ntBASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 AL355385.1-201ENST00000606123 409 ntBASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 AL139288.1-201ENST00000623748 933 ntBASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NECTIN4Q96NY8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 MTCL1P1-201ENST00000446207 792 ntBASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NECTIN4Q96NY8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms