Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 TSPY6P-201ENST00000448518 926 ntBASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 KRT18P16-201ENST00000510337 1294 ntBASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 MIR4758-201ENST00000577688 71 ntBASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CHMP6Q96FZ7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 AC006116.8-202ENST00000587620 1550 ntBASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 AL109923.1-201ENST00000618799 583 ntBASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CHMP6Q96FZ7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 LINC00602-201ENST00000629776 2065 ntBASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 AC091874.3-201ENST00000512672 1195 ntBASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 AC092118.2-201ENST00000613495 667 ntBASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 AL121761.2-201ENST00000598007 1648 ntBASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP6Q96FZ7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP6Q96FZ7 TUBB8P6-201ENST00000436895 1288 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms