Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM11Q96F44 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRIM11Q96F44 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.42■□□□□ 0.7
TRIM11Q96F44 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM11Q96F44 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM11Q96F44 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 AL512604.3-201ENST00000569583 964 ntBASIC19.42■□□□□ 0.7
TRIM11Q96F44 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM11Q96F44 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM11Q96F44 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 AC018470.1-201ENST00000624790 3129 ntBASIC19.42■□□□□ 0.7
TRIM11Q96F44 REXO1L9P-201ENST00000604264 2108 ntBASIC19.42■□□□□ 0.7
TRIM11Q96F44 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM11Q96F44 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM11Q96F44 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM11Q96F44 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM11Q96F44 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM11Q96F44 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM11Q96F44 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRIM11Q96F44 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM11Q96F44 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
TRIM11Q96F44 HTR7P1-202ENST00000624664 4411 ntBASIC19.41■□□□□ 0.7
TRIM11Q96F44 AC008764.6-201ENST00000595909 2069 ntBASIC19.41■□□□□ 0.7
TRIM11Q96F44 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM11Q96F44 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TRIM11Q96F44 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TRIM11Q96F44 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM11Q96F44 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM11Q96F44 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM11Q96F44 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM11Q96F44 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM11Q96F44 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM11Q96F44 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM11Q96F44 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM11Q96F44 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM11Q96F44 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM11Q96F44 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM11Q96F44 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM11Q96F44 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM11Q96F44 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM11Q96F44 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM11Q96F44 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 PHGDH-209ENST00000641074 1780 ntBASIC19.4■□□□□ 0.7
TRIM11Q96F44 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.4■□□□□ 0.7
TRIM11Q96F44 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 NAPSB-206ENST00000562112 1266 ntBASIC19.4■□□□□ 0.7
TRIM11Q96F44 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.4■□□□□ 0.7
TRIM11Q96F44 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRIM11Q96F44 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 AL096828.2-201ENST00000567259 1965 ntBASIC19.4■□□□□ 0.7
TRIM11Q96F44 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRIM11Q96F44 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM11Q96F44 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM11Q96F44 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM11Q96F44 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM11Q96F44 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM11Q96F44 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
TRIM11Q96F44 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.39■□□□□ 0.7
TRIM11Q96F44 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.39■□□□□ 0.7
TRIM11Q96F44 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM11Q96F44 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM11Q96F44 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM11Q96F44 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM11Q96F44 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM11Q96F44 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM11Q96F44 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM11Q96F44 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM11Q96F44 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM11Q96F44 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TRIM11Q96F44 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM11Q96F44 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TRIM11Q96F44 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM11Q96F44 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM11Q96F44 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM11Q96F44 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM11Q96F44 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM11Q96F44 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM11Q96F44 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM11Q96F44 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms