Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
HDAC11Q96DB2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 AL354751.1-201ENST00000412768 1863 ntBASIC18.89■□□□□ 0.61
HDAC11Q96DB2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 MIR149-201ENST00000384879 89 ntBASIC18.89■□□□□ 0.61
HDAC11Q96DB2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.89■□□□□ 0.61
HDAC11Q96DB2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 AC097493.4-201ENST00000641197 219 ntBASIC18.89■□□□□ 0.61
HDAC11Q96DB2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HDAC11Q96DB2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 SLC25A3P1-201ENST00000443844 931 ntBASIC18.88■□□□□ 0.61
HDAC11Q96DB2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 AC133561.5-201ENST00000635547 218 ntBASIC18.88■□□□□ 0.61
HDAC11Q96DB2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 AC009102.3-201ENST00000623118 1491 ntBASIC18.88■□□□□ 0.61
HDAC11Q96DB2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HDAC11Q96DB2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 SDHAP2-201ENST00000455183 2001 ntBASIC18.87■□□□□ 0.61
HDAC11Q96DB2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 SEC1P-202ENST00000473944 940 ntBASIC18.87■□□□□ 0.61
HDAC11Q96DB2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 AC009065.1-201ENST00000564055 1225 ntBASIC18.87■□□□□ 0.61
HDAC11Q96DB2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 AL138966.2-201ENST00000621997 464 ntBASIC18.87■□□□□ 0.61
HDAC11Q96DB2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDAC11Q96DB2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HDAC11Q96DB2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms