Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TNFRSF25Q93038 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TNFRSF25Q93038 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TNFRSF25Q93038 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TNFRSF25Q93038 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TNFRSF25Q93038 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TNFRSF25Q93038 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
TNFRSF25Q93038 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
TNFRSF25Q93038 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 AC083849.1-201ENST00000615227 514 ntBASIC20.82■□□□□ 0.92
TNFRSF25Q93038 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF25Q93038 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.81■□□□□ 0.92
TNFRSF25Q93038 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.81■□□□□ 0.92
TNFRSF25Q93038 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 KRT89P-201ENST00000620027 1478 ntBASIC20.81■□□□□ 0.92
TNFRSF25Q93038 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFRSF25Q93038 AC138028.4-201ENST00000564984 1845 ntBASIC20.81■□□□□ 0.92
TNFRSF25Q93038 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 AC113404.2-201ENST00000507884 177 ntBASIC20.8■□□□□ 0.92
TNFRSF25Q93038 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 VENTXP5-201ENST00000523979 775 ntBASIC20.8■□□□□ 0.92
TNFRSF25Q93038 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF25Q93038 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms