Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.32■□□□□ 0.36
TM9SF4Q92544 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TM9SF4Q92544 AL121894.2-201ENST00000602977 491 ntBASIC17.32■□□□□ 0.36
TM9SF4Q92544 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TM9SF4Q92544 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF4Q92544 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TM9SF4Q92544 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF4Q92544 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF4Q92544 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.32■□□□□ 0.36
TM9SF4Q92544 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF4Q92544 AC090164.3-201ENST00000610780 2143 ntBASIC17.32■□□□□ 0.36
TM9SF4Q92544 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.32■□□□□ 0.36
TM9SF4Q92544 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM9SF4Q92544 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF4Q92544 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF4Q92544 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF4Q92544 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.31■□□□□ 0.36
TM9SF4Q92544 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF4Q92544 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF4Q92544 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF4Q92544 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.31■□□□□ 0.36
TM9SF4Q92544 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF4Q92544 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TM9SF4Q92544 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TM9SF4Q92544 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.31■□□□□ 0.36
TM9SF4Q92544 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF4Q92544 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TM9SF4Q92544 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.31■□□□□ 0.36
TM9SF4Q92544 AL121672.3-201ENST00000608644 468 ntBASIC17.31■□□□□ 0.36
TM9SF4Q92544 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF4Q92544 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF4Q92544 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.31■□□□□ 0.36
TM9SF4Q92544 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.31■□□□□ 0.36
TM9SF4Q92544 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF4Q92544 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF4Q92544 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.31■□□□□ 0.36
TM9SF4Q92544 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF4Q92544 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM9SF4Q92544 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 GPAT2P1-201ENST00000444924 1672 ntBASIC17.3■□□□□ 0.36
TM9SF4Q92544 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 AC026396.1-201ENST00000419388 421 ntBASIC17.3■□□□□ 0.36
TM9SF4Q92544 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 BX276092.5-203ENST00000456199 560 ntBASIC17.3■□□□□ 0.36
TM9SF4Q92544 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 AC024243.1-201ENST00000609234 778 ntBASIC17.3■□□□□ 0.36
TM9SF4Q92544 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.3■□□□□ 0.36
TM9SF4Q92544 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM9SF4Q92544 FP475955.4-201ENST00000623131 1990 ntBASIC17.29■□□□□ 0.36
TM9SF4Q92544 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 LTB4R2-202ENST00000528054 3092 ntBASIC17.29■□□□□ 0.36
TM9SF4Q92544 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TM9SF4Q92544 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TM9SF4Q92544 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TM9SF4Q92544 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TM9SF4Q92544 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TM9SF4Q92544 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.29■□□□□ 0.36
TM9SF4Q92544 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms