Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 KRT18P13-201ENST00000400056 1290 ntBASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 MTCL1P1-201ENST00000446207 792 ntBASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 AL049840.3-201ENST00000602669 611 ntBASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 MIR7706-201ENST00000613747 67 ntBASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF4Q8WZA2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 AC106730.1-201ENST00000566722 1090 ntBASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 AP001269.4-201ENST00000609611 512 ntBASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 AC139530.3-201ENST00000620344 690 ntBASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 PAN3-AS1-201ENST00000563843 1351 ntBASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC23.99■■□□□ 1.43
RAPGEF4Q8WZA2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 AC139887.3-201ENST00000568585 713 ntBASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 AL138831.2-201ENST00000606564 490 ntBASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 INTS4P1-201ENST00000438455 1935 ntBASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC23.98■■□□□ 1.43
RAPGEF4Q8WZA2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 SCARNA2-201ENST00000458748 420 ntBASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 FAM215A-202ENST00000632077 792 ntBASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
RAPGEF4Q8WZA2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 LINC00602-201ENST00000629776 2065 ntBASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23.96■■□□□ 1.43
RAPGEF4Q8WZA2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms