Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 AC006538.3-201ENST00000612495 578 ntBASIC18.37■□□□□ 0.53
HMGB4Q8WW32 AL773604.1-201ENST00000617417 272 ntBASIC18.37■□□□□ 0.53
HMGB4Q8WW32 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.37■□□□□ 0.53
HMGB4Q8WW32 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HMGB4Q8WW32 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 MIR149-201ENST00000384879 89 ntBASIC18.36■□□□□ 0.53
HMGB4Q8WW32 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HMGB4Q8WW32 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 AC114341.1-201ENST00000618070 349 ntBASIC18.35■□□□□ 0.53
HMGB4Q8WW32 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HMGB4Q8WW32 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 AC009102.3-201ENST00000623118 1491 ntBASIC18.34■□□□□ 0.53
HMGB4Q8WW32 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.34■□□□□ 0.53
HMGB4Q8WW32 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms