Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM41Q8WV44 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC31.37■■■□□ 2.61
TRIM41Q8WV44 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
TRIM41Q8WV44 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC31.37■■■□□ 2.61
TRIM41Q8WV44 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM41Q8WV44 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC31.37■■■□□ 2.61
TRIM41Q8WV44 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM41Q8WV44 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 HLA-V-201ENST00000429037 534 ntBASIC31.36■■■□□ 2.61
TRIM41Q8WV44 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC31.36■■■□□ 2.61
TRIM41Q8WV44 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 CYP51A1P1-201ENST00000492267 1507 ntBASIC31.35■■■□□ 2.61
TRIM41Q8WV44 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 REXO1L6P-202ENST00000619970 1078 ntBASIC31.35■■■□□ 2.61
TRIM41Q8WV44 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM41Q8WV44 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
TRIM41Q8WV44 KRT8P50-201ENST00000562022 1438 ntBASIC31.34■■■□□ 2.61
TRIM41Q8WV44 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC31.34■■■□□ 2.61
TRIM41Q8WV44 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TRIM41Q8WV44 YBX2P1-201ENST00000394192 760 ntBASIC31.34■■■□□ 2.61
TRIM41Q8WV44 KRT18P67-201ENST00000432816 1264 ntBASIC31.34■■■□□ 2.61
TRIM41Q8WV44 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TRIM41Q8WV44 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TRIM41Q8WV44 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TRIM41Q8WV44 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC31.34■■■□□ 2.61
TRIM41Q8WV44 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TRIM41Q8WV44 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM41Q8WV44 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC31.33■■■□□ 2.61
TRIM41Q8WV44 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC31.33■■■□□ 2.61
TRIM41Q8WV44 SCARNA2-201ENST00000458748 420 ntBASIC31.33■■■□□ 2.61
TRIM41Q8WV44 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC31.33■■■□□ 2.61
TRIM41Q8WV44 AL049840.3-201ENST00000602669 611 ntBASIC31.33■■■□□ 2.61
TRIM41Q8WV44 AL356488.2-201ENST00000602755 427 ntBASIC31.33■■■□□ 2.61
TRIM41Q8WV44 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM41Q8WV44 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC31.33■■■□□ 2.61
TRIM41Q8WV44 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
TRIM41Q8WV44 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM41Q8WV44 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM41Q8WV44 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM41Q8WV44 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM41Q8WV44 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM41Q8WV44 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM41Q8WV44 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 GK-202ENST00000378941 458 ntTSL 3 BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 MIR770-201ENST00000390219 98 ntBASIC31.32■■■□□ 2.6
TRIM41Q8WV44 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM41Q8WV44 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 HLA-F-220ENST00000434407 884 ntBASIC31.31■■■□□ 2.6
TRIM41Q8WV44 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC31.31■■■□□ 2.6
TRIM41Q8WV44 KRT18P41-201ENST00000518924 1277 ntBASIC31.31■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms