Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 HCG4P8-203ENST00000443049 980 ntBASIC18.5■□□□□ 0.55
CHD5Q8TDI0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 AL353801.3-201ENST00000609898 542 ntBASIC18.5■□□□□ 0.55
CHD5Q8TDI0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD5Q8TDI0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 AC091607.1-201ENST00000490318 1060 ntBASIC18.49■□□□□ 0.55
CHD5Q8TDI0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CHD5Q8TDI0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 AL845331.1-201ENST00000424978 1190 ntBASIC18.48■□□□□ 0.55
CHD5Q8TDI0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.48■□□□□ 0.55
CHD5Q8TDI0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHD5Q8TDI0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 AL354751.1-201ENST00000412768 1863 ntBASIC18.47■□□□□ 0.55
CHD5Q8TDI0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 AC233702.3-201ENST00000578656 1387 ntBASIC18.47■□□□□ 0.55
CHD5Q8TDI0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.47■□□□□ 0.55
CHD5Q8TDI0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CHD5Q8TDI0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms