Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRPM4Q8TD43 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRPM4Q8TD43 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
TRPM4Q8TD43 KRT18P28-201ENST00000453838 1332 ntBASIC21.64■■□□□ 1.05
TRPM4Q8TD43 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 AC211486.1-202ENST00000416371 468 ntBASIC21.64■■□□□ 1.05
TRPM4Q8TD43 AP006288.1-201ENST00000446065 395 ntBASIC21.64■■□□□ 1.05
TRPM4Q8TD43 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 AC211476.1-201ENST00000503899 468 ntBASIC21.64■■□□□ 1.05
TRPM4Q8TD43 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
TRPM4Q8TD43 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.63■■□□□ 1.05
TRPM4Q8TD43 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 METTL21AP1-201ENST00000438852 635 ntBASIC21.63■■□□□ 1.05
TRPM4Q8TD43 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRPM4Q8TD43 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 PCDHAC2-203ENST00000615316 3011 ntBASIC21.62■■□□□ 1.05
TRPM4Q8TD43 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 LAGE3P1-201ENST00000425356 484 ntBASIC21.62■■□□□ 1.05
TRPM4Q8TD43 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 MTDHP5-201ENST00000598980 586 ntBASIC21.62■■□□□ 1.05
TRPM4Q8TD43 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.62■■□□□ 1.05
TRPM4Q8TD43 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 AC064836.3-201ENST00000607928 673 ntBASIC21.61■■□□□ 1.05
TRPM4Q8TD43 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TRPM4Q8TD43 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms