Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 REXO1L9P-201ENST00000604264 2108 ntBASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 AC006058.3-201ENST00000606217 1069 ntBASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 AL357033.4-201ENST00000617703 1807 ntBASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DNAAF1Q8NEP3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 AC026271.3-201ENST00000571884 352 ntBASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 GNAS-203ENST00000306120 1878 ntBASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 KRT8P32-201ENST00000512863 1461 ntBASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.16■□□□□ 0.18
DNAAF1Q8NEP3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 KRT8P3-201ENST00000519669 1449 ntBASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.15■□□□□ 0.18
DNAAF1Q8NEP3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms