Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PNMA1Q8ND90 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PNMA1Q8ND90 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.3■■□□□ 1
PNMA1Q8ND90 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
PNMA1Q8ND90 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.3■■□□□ 1
PNMA1Q8ND90 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.3■■□□□ 1
PNMA1Q8ND90 AC008687.5-201ENST00000593746 558 ntBASIC21.3■■□□□ 1
PNMA1Q8ND90 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.3■■□□□ 1
PNMA1Q8ND90 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PNMA1Q8ND90 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.3■■□□□ 1
PNMA1Q8ND90 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PNMA1Q8ND90 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.3■■□□□ 1
PNMA1Q8ND90 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PNMA1Q8ND90 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
PNMA1Q8ND90 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.3■■□□□ 1
PNMA1Q8ND90 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.3■■□□□ 1
PNMA1Q8ND90 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.3■■□□□ 1
PNMA1Q8ND90 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PNMA1Q8ND90 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PNMA1Q8ND90 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
PNMA1Q8ND90 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PNMA1Q8ND90 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PNMA1Q8ND90 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.29■■□□□ 1
PNMA1Q8ND90 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.29■■□□□ 1
PNMA1Q8ND90 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.29■■□□□ 1
PNMA1Q8ND90 TSSC2-201ENST00000450217 709 ntBASIC21.29■■□□□ 1
PNMA1Q8ND90 AC113404.2-201ENST00000507884 177 ntBASIC21.29■■□□□ 1
PNMA1Q8ND90 AC004263.2-201ENST00000617183 678 ntBASIC21.29■■□□□ 1
PNMA1Q8ND90 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.29■■□□□ 1
PNMA1Q8ND90 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PNMA1Q8ND90 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PNMA1Q8ND90 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.29■■□□□ 1
PNMA1Q8ND90 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PNMA1Q8ND90 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PNMA1Q8ND90 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PNMA1Q8ND90 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PNMA1Q8ND90 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PNMA1Q8ND90 AL353692.3-201ENST00000407031 1396 ntBASIC21.28■■□□□ 1
PNMA1Q8ND90 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.28■■□□□ 1
PNMA1Q8ND90 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.28■■□□□ 1
PNMA1Q8ND90 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.28■■□□□ 1
PNMA1Q8ND90 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.28■■□□□ 1
PNMA1Q8ND90 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.28■■□□□ 1
PNMA1Q8ND90 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PNMA1Q8ND90 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PNMA1Q8ND90 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PNMA1Q8ND90 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
PNMA1Q8ND90 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PNMA1Q8ND90 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.28■■□□□ 1
PNMA1Q8ND90 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.28■■□□□ 1
PNMA1Q8ND90 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
PNMA1Q8ND90 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.27■■□□□ 1
PNMA1Q8ND90 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PNMA1Q8ND90 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.27■■□□□ 1
PNMA1Q8ND90 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.27■■□□□ 1
PNMA1Q8ND90 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.27■■□□□ 1
PNMA1Q8ND90 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.27■■□□□ 1
PNMA1Q8ND90 NPAP1P7-201ENST00000613027 823 ntBASIC21.27■■□□□ 1
PNMA1Q8ND90 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.27■■□□□ 1
PNMA1Q8ND90 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PNMA1Q8ND90 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
PNMA1Q8ND90 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.27■■□□□ 1
PNMA1Q8ND90 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.27■■□□□ 1
PNMA1Q8ND90 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.27■■□□□ 1
PNMA1Q8ND90 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PNMA1Q8ND90 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
PNMA1Q8ND90 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PNMA1Q8ND90 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PNMA1Q8ND90 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PNMA1Q8ND90 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.27■□□□□ 0.99
PNMA1Q8ND90 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
PNMA1Q8ND90 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PNMA1Q8ND90 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.26■□□□□ 0.99
PNMA1Q8ND90 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PNMA1Q8ND90 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.26■□□□□ 0.99
PNMA1Q8ND90 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PNMA1Q8ND90 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PNMA1Q8ND90 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PNMA1Q8ND90 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PNMA1Q8ND90 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.26■□□□□ 0.99
PNMA1Q8ND90 CHCHD2P8-201ENST00000429873 447 ntBASIC21.26■□□□□ 0.99
PNMA1Q8ND90 ATP5G2P1-201ENST00000433580 426 ntBASIC21.26■□□□□ 0.99
PNMA1Q8ND90 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.26■□□□□ 0.99
PNMA1Q8ND90 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms