Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.96■□□□□ 0.47
CPSF7Q8N684 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.96■□□□□ 0.47
CPSF7Q8N684 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.96■□□□□ 0.47
CPSF7Q8N684 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPSF7Q8N684 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CPSF7Q8N684 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.96■□□□□ 0.47
CPSF7Q8N684 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CPSF7Q8N684 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CPSF7Q8N684 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 NIFKP9-201ENST00000419265 221 ntBASIC17.95■□□□□ 0.46
CPSF7Q8N684 NUDT16P1-203ENST00000513809 620 ntBASIC17.95■□□□□ 0.46
CPSF7Q8N684 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 CR392000.1-201ENST00000624770 1228 ntBASIC17.95■□□□□ 0.46
CPSF7Q8N684 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
CPSF7Q8N684 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPSF7Q8N684 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CPSF7Q8N684 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPSF7Q8N684 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.93■□□□□ 0.46
CPSF7Q8N684 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.93■□□□□ 0.46
CPSF7Q8N684 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPSF7Q8N684 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.93■□□□□ 0.46
CPSF7Q8N684 MYLKP1-201ENST00000509077 1580 ntBASIC17.93■□□□□ 0.46
CPSF7Q8N684 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPSF7Q8N684 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPSF7Q8N684 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPSF7Q8N684 Z85996.1-201ENST00000494644 937 ntBASIC17.93■□□□□ 0.46
CPSF7Q8N684 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.93■□□□□ 0.46
CPSF7Q8N684 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.93■□□□□ 0.46
CPSF7Q8N684 REXO1L10P-201ENST00000615707 1290 ntBASIC17.93■□□□□ 0.46
CPSF7Q8N684 AC012317.2-201ENST00000623305 2251 ntBASIC17.93■□□□□ 0.46
CPSF7Q8N684 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPSF7Q8N684 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.93■□□□□ 0.46
CPSF7Q8N684 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CPSF7Q8N684 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPSF7Q8N684 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPSF7Q8N684 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms