Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 AC125437.2-201ENST00000625180 2167 ntBASIC18.74■□□□□ 0.59
SLC44A3Q8N4M1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 RPS2P1-201ENST00000434010 821 ntBASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 SART3-203ENST00000546611 1184 ntBASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 AC034105.1-201ENST00000563488 319 ntBASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC44A3Q8N4M1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 MED15P5-201ENST00000423150 992 ntBASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 AL591424.1-201ENST00000442569 1213 ntBASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 AL139424.1-201ENST00000607572 797 ntBASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SLC44A3Q8N4M1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 HLA-J-201ENST00000462773 1622 ntBASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 MTMR9LP-203ENST00000426597 1545 ntBASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 MIR149-201ENST00000384879 89 ntBASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 RPSAP43-201ENST00000402237 625 ntBASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 HMGN1P19-201ENST00000436976 333 ntBASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 AC098831.1-202ENST00000438821 336 ntBASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 ABCD1P5-201ENST00000445663 754 ntBASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 AC092910.1-201ENST00000482027 1129 ntBASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 AC011467.2-201ENST00000598425 242 ntBASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 AL138831.2-201ENST00000606564 490 ntBASIC18.71■□□□□ 0.59
SLC44A3Q8N4M1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms