Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.18■□□□□ 0.82
NME8Q8N427 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.18■□□□□ 0.82
NME8Q8N427 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.18■□□□□ 0.82
NME8Q8N427 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.18■□□□□ 0.82
NME8Q8N427 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.18■□□□□ 0.82
NME8Q8N427 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.18■□□□□ 0.82
NME8Q8N427 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NME8Q8N427 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NME8Q8N427 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NME8Q8N427 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NME8Q8N427 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NME8Q8N427 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NME8Q8N427 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NME8Q8N427 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.17■□□□□ 0.82
NME8Q8N427 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NME8Q8N427 AL049812.1-201ENST00000432563 2267 ntBASIC20.17■□□□□ 0.82
NME8Q8N427 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.17■□□□□ 0.82
NME8Q8N427 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NME8Q8N427 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
NME8Q8N427 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NME8Q8N427 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
NME8Q8N427 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NME8Q8N427 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.17■□□□□ 0.82
NME8Q8N427 AC011840.4-201ENST00000578471 627 ntBASIC20.17■□□□□ 0.82
NME8Q8N427 AL732292.2-201ENST00000609649 430 ntBASIC20.17■□□□□ 0.82
NME8Q8N427 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NME8Q8N427 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NME8Q8N427 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NME8Q8N427 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.17■□□□□ 0.82
NME8Q8N427 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NME8Q8N427 MYLKP1-201ENST00000509077 1580 ntBASIC20.17■□□□□ 0.82
NME8Q8N427 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.16■□□□□ 0.82
NME8Q8N427 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.16■□□□□ 0.82
NME8Q8N427 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.16■□□□□ 0.82
NME8Q8N427 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.16■□□□□ 0.82
NME8Q8N427 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.16■□□□□ 0.82
NME8Q8N427 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.16■□□□□ 0.82
NME8Q8N427 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
NME8Q8N427 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NME8Q8N427 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.16■□□□□ 0.82
NME8Q8N427 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 AC004263.2-201ENST00000617183 678 ntBASIC20.16■□□□□ 0.82
NME8Q8N427 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.16■□□□□ 0.82
NME8Q8N427 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NME8Q8N427 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NME8Q8N427 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.15■□□□□ 0.82
NME8Q8N427 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 AC116562.4-201ENST00000641316 2276 ntBASIC20.15■□□□□ 0.82
NME8Q8N427 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
NME8Q8N427 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 FDX1P1-201ENST00000449115 551 ntBASIC20.15■□□□□ 0.82
NME8Q8N427 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.15■□□□□ 0.82
NME8Q8N427 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.15■□□□□ 0.82
NME8Q8N427 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.15■□□□□ 0.82
NME8Q8N427 AL353801.3-201ENST00000609898 542 ntBASIC20.15■□□□□ 0.82
NME8Q8N427 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 LINC00167-201ENST00000530583 1419 ntBASIC20.15■□□□□ 0.82
NME8Q8N427 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NME8Q8N427 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NME8Q8N427 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms