Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 AC024243.1-201ENST00000609234 778 ntBASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 SDHAP2-201ENST00000455183 2001 ntBASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC116Q8IYX3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 ECEL1P3-201ENST00000427961 737 ntBASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 SLC25A3P1-201ENST00000443844 931 ntBASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 AL162741.1-201ENST00000565563 1558 ntBASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 AC009102.3-201ENST00000623118 1491 ntBASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC116Q8IYX3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 AC012183.1-201ENST00000625197 499 ntBASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 AC093677.2-201ENST00000600169 1863 ntBASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC116Q8IYX3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms