Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
TRIM42Q8IWZ5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 HTR7P1-201ENST00000538670 1336 ntBASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 KRT18P41-201ENST00000518924 1277 ntBASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 KRT8P11-201ENST00000409686 1436 ntBASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM42Q8IWZ5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 UNC93B5-201ENST00000530315 699 ntBASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 AC099398.1-201ENST00000567919 2776 ntBASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
TRIM42Q8IWZ5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 ESRRAP1-201ENST00000400596 1257 ntBASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 Z85996.1-201ENST00000494644 937 ntBASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 TMEM191A-211ENST00000637163 1067 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms