Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 AL096828.2-201ENST00000567259 1965 ntBASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 KRT16P5-201ENST00000455284 522 ntBASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 AC008403.3-201ENST00000598924 454 ntBASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.25■□□□□ 0.51
NUDCD3Q8IVD9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 AC091390.4-202ENST00000476426 537 ntBASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 GMCL1P1-201ENST00000463439 1581 ntBASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NUDCD3Q8IVD9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 KRT17P3-201ENST00000420566 1262 ntBASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 AC004980.1-204ENST00000429707 299 ntBASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
NUDCD3Q8IVD9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms