Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
HPS6Q86YV9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.12■□□□□ 0.49
HPS6Q86YV9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HPS6Q86YV9 LINC01238-205ENST00000567549 1107 ntBASIC18.12■□□□□ 0.49
HPS6Q86YV9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.12■□□□□ 0.49
HPS6Q86YV9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.12■□□□□ 0.49
HPS6Q86YV9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.12■□□□□ 0.49
HPS6Q86YV9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS6Q86YV9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS6Q86YV9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HPS6Q86YV9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS6Q86YV9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.12■□□□□ 0.49
HPS6Q86YV9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS6Q86YV9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
HPS6Q86YV9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS6Q86YV9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.11■□□□□ 0.49
HPS6Q86YV9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HPS6Q86YV9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 TSPY14P-201ENST00000303979 915 ntBASIC18.11■□□□□ 0.49
HPS6Q86YV9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 AL390955.1-201ENST00000428694 934 ntBASIC18.11■□□□□ 0.49
HPS6Q86YV9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HPS6Q86YV9 KRT18P57-201ENST00000443599 1254 ntBASIC18.11■□□□□ 0.49
HPS6Q86YV9 YBX1P10-201ENST00000444752 975 ntBASIC18.11■□□□□ 0.49
HPS6Q86YV9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.11■□□□□ 0.49
HPS6Q86YV9 ATP5G1P1-201ENST00000448724 379 ntBASIC18.11■□□□□ 0.49
HPS6Q86YV9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
HPS6Q86YV9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.11■□□□□ 0.49
HPS6Q86YV9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.11■□□□□ 0.49
HPS6Q86YV9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.11■□□□□ 0.49
HPS6Q86YV9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS6Q86YV9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.1■□□□□ 0.49
HPS6Q86YV9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.1■□□□□ 0.49
HPS6Q86YV9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.1■□□□□ 0.49
HPS6Q86YV9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
HPS6Q86YV9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.1■□□□□ 0.49
HPS6Q86YV9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 DUX4L26-201ENST00000489078 1255 ntBASIC18.1■□□□□ 0.49
HPS6Q86YV9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.1■□□□□ 0.49
HPS6Q86YV9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 AC131212.4-201ENST00000623606 975 ntBASIC18.1■□□□□ 0.49
HPS6Q86YV9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
HPS6Q86YV9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HPS6Q86YV9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HPS6Q86YV9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.09■□□□□ 0.49
HPS6Q86YV9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS6Q86YV9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS6Q86YV9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS6Q86YV9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS6Q86YV9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS6Q86YV9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.09■□□□□ 0.49
HPS6Q86YV9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
HPS6Q86YV9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS6Q86YV9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS6Q86YV9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.09■□□□□ 0.49
HPS6Q86YV9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HPS6Q86YV9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HPS6Q86YV9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS6Q86YV9 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.09■□□□□ 0.49
HPS6Q86YV9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.09■□□□□ 0.49
HPS6Q86YV9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.09■□□□□ 0.49
HPS6Q86YV9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HPS6Q86YV9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.09■□□□□ 0.49
HPS6Q86YV9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.09■□□□□ 0.49
HPS6Q86YV9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS6Q86YV9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HPS6Q86YV9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS6Q86YV9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HPS6Q86YV9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HPS6Q86YV9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.09■□□□□ 0.49
HPS6Q86YV9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HPS6Q86YV9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms