Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LRRTM4Q86VH4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
LRRTM4Q86VH4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM4Q86VH4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM4Q86VH4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM4Q86VH4 WIZP1-201ENST00000531444 2299 ntBASIC17.98■□□□□ 0.47
LRRTM4Q86VH4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM4Q86VH4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM4Q86VH4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM4Q86VH4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRTM4Q86VH4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 AL024508.2-201ENST00000607749 1894 ntBASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 RNF126P1-202ENST00000569893 925 ntBASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRTM4Q86VH4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 IGHGP-201ENST00000390555 1178 ntBASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 TSPY22P-201ENST00000427496 604 ntBASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 BX276092.5-203ENST00000456199 560 ntBASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 AC005332.3-201ENST00000589904 676 ntBASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 GPR32P1-201ENST00000601788 811 ntBASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 AL121672.3-201ENST00000608644 468 ntBASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 Z83836.1-201ENST00000624605 1642 ntBASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRTM4Q86VH4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LRRTM4Q86VH4 AC004408.2-201ENST00000623613 2777 ntBASIC17.96■□□□□ 0.46
LRRTM4Q86VH4 GMCL1P1-201ENST00000463439 1581 ntBASIC17.96■□□□□ 0.46
LRRTM4Q86VH4 AL138781.2-201ENST00000617896 1843 ntBASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 KRT8P26-201ENST00000534154 1276 ntBASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms