Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 AC125634.1-201ENST00000438758 1403 ntBASIC18.81■□□□□ 0.6
DENND4AQ7Z401 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.81■□□□□ 0.6
DENND4AQ7Z401 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 AL355385.1-201ENST00000606123 409 ntBASIC18.81■□□□□ 0.6
DENND4AQ7Z401 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.81■□□□□ 0.6
DENND4AQ7Z401 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 AC093484.2-201ENST00000580996 2166 ntBASIC18.8■□□□□ 0.6
DENND4AQ7Z401 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 AC008687.5-201ENST00000593746 558 ntBASIC18.8■□□□□ 0.6
DENND4AQ7Z401 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 MTDHP4-201ENST00000600287 670 ntBASIC18.8■□□□□ 0.6
DENND4AQ7Z401 HLA-J-201ENST00000462773 1622 ntBASIC18.8■□□□□ 0.6
DENND4AQ7Z401 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DENND4AQ7Z401 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 AL356309.3-201ENST00000624132 1934 ntBASIC18.79■□□□□ 0.6
DENND4AQ7Z401 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 DNAJB3-202ENST00000449667 1266 ntBASIC18.79■□□□□ 0.6
DENND4AQ7Z401 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DENND4AQ7Z401 AL032819.2-201ENST00000624543 2162 ntBASIC18.79■□□□□ 0.6
DENND4AQ7Z401 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.78■□□□□ 0.6
DENND4AQ7Z401 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
DENND4AQ7Z401 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DENND4AQ7Z401 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND4AQ7Z401 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND4AQ7Z401 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.78■□□□□ 0.6
DENND4AQ7Z401 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND4AQ7Z401 AC004967.1-201ENST00000453589 447 ntBASIC18.78■□□□□ 0.6
DENND4AQ7Z401 AC068472.1-201ENST00000474589 881 ntBASIC18.78■□□□□ 0.6
DENND4AQ7Z401 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.78■□□□□ 0.6
DENND4AQ7Z401 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.78■□□□□ 0.6
DENND4AQ7Z401 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DENND4AQ7Z401 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DENND4AQ7Z401 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DENND4AQ7Z401 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.78■□□□□ 0.6
DENND4AQ7Z401 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DENND4AQ7Z401 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND4AQ7Z401 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
DENND4AQ7Z401 MTCL1P1-201ENST00000446207 792 ntBASIC18.77■□□□□ 0.6
DENND4AQ7Z401 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.77■□□□□ 0.6
DENND4AQ7Z401 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND4AQ7Z401 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND4AQ7Z401 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DENND4AQ7Z401 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.77■□□□□ 0.6
DENND4AQ7Z401 PCDHAC2-203ENST00000615316 3011 ntBASIC18.77■□□□□ 0.6
DENND4AQ7Z401 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms