Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC22.46■■□□□ 1.19
CASC1Q6TDU7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC22.46■■□□□ 1.19
CASC1Q6TDU7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CASC1Q6TDU7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CASC1Q6TDU7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CASC1Q6TDU7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CASC1Q6TDU7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CASC1Q6TDU7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.46■■□□□ 1.19
CASC1Q6TDU7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CASC1Q6TDU7 MIR4497-201ENST00000583208 89 ntBASIC22.46■■□□□ 1.19
CASC1Q6TDU7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CASC1Q6TDU7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CASC1Q6TDU7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
CASC1Q6TDU7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CASC1Q6TDU7 GMCL1P1-201ENST00000463439 1581 ntBASIC22.46■■□□□ 1.19
CASC1Q6TDU7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CASC1Q6TDU7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC22.45■■□□□ 1.19
CASC1Q6TDU7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CASC1Q6TDU7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 ESPNP-201ENST00000270691 2015 ntBASIC22.45■■□□□ 1.18
CASC1Q6TDU7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 KRT17P2-201ENST00000300992 1314 ntBASIC22.45■■□□□ 1.18
CASC1Q6TDU7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 KRT8P50-201ENST00000562022 1438 ntBASIC22.45■■□□□ 1.18
CASC1Q6TDU7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CASC1Q6TDU7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 AC068880.1-201ENST00000507289 2297 ntBASIC22.44■■□□□ 1.18
CASC1Q6TDU7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.44■■□□□ 1.18
CASC1Q6TDU7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 UNC93B2-201ENST00000285383 730 ntBASIC22.43■■□□□ 1.18
CASC1Q6TDU7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 AC026471.1-201ENST00000564629 3026 ntBASIC22.43■■□□□ 1.18
CASC1Q6TDU7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 POR-209ENST00000439269 1858 ntTSL 2 BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CASC1Q6TDU7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.42■■□□□ 1.18
CASC1Q6TDU7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CASC1Q6TDU7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CASC1Q6TDU7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CASC1Q6TDU7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CASC1Q6TDU7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CASC1Q6TDU7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CASC1Q6TDU7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CASC1Q6TDU7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC22.42■■□□□ 1.18
CASC1Q6TDU7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CASC1Q6TDU7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms