Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 AC005052.1-201ENST00000625181 2492 ntBASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 AC073111.5-205ENST00000641717 521 ntBASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 MYCNOS-205ENST00000641950 531 ntBASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 AP001271.2-201ENST00000624018 1556 ntBASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 AL121761.2-201ENST00000598007 1648 ntBASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 AC105020.1-201ENST00000435356 2205 ntBASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TMEM88Q6PEY1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM88Q6PEY1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM88Q6PEY1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM88Q6PEY1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM88Q6PEY1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM88Q6PEY1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM88Q6PEY1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM88Q6PEY1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TMEM88Q6PEY1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TMEM88Q6PEY1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEM88Q6PEY1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms