Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CTR9Q6PD62 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTR9Q6PD62 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.75■■□□□ 1.07
CTR9Q6PD62 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.75■■□□□ 1.07
CTR9Q6PD62 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.75■■□□□ 1.07
CTR9Q6PD62 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.75■■□□□ 1.07
CTR9Q6PD62 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CTR9Q6PD62 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CTR9Q6PD62 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.75■■□□□ 1.07
CTR9Q6PD62 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTR9Q6PD62 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTR9Q6PD62 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTR9Q6PD62 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CTR9Q6PD62 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTR9Q6PD62 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTR9Q6PD62 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CTR9Q6PD62 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTR9Q6PD62 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.74■■□□□ 1.07
CTR9Q6PD62 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.74■■□□□ 1.07
CTR9Q6PD62 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CTR9Q6PD62 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 HCG4P8-203ENST00000443049 980 ntBASIC21.74■■□□□ 1.07
CTR9Q6PD62 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CTR9Q6PD62 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.74■■□□□ 1.07
CTR9Q6PD62 KRT18P56-201ENST00000507275 550 ntBASIC21.74■■□□□ 1.07
CTR9Q6PD62 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.74■■□□□ 1.07
CTR9Q6PD62 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.74■■□□□ 1.07
CTR9Q6PD62 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CTR9Q6PD62 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTR9Q6PD62 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.73■■□□□ 1.07
CTR9Q6PD62 LINC01126-201ENST00000623515 1646 ntBASIC21.73■■□□□ 1.07
CTR9Q6PD62 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTR9Q6PD62 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.73■■□□□ 1.07
CTR9Q6PD62 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTR9Q6PD62 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTR9Q6PD62 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.73■■□□□ 1.07
CTR9Q6PD62 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.73■■□□□ 1.07
CTR9Q6PD62 CHCHD2P8-201ENST00000429873 447 ntBASIC21.73■■□□□ 1.07
CTR9Q6PD62 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.73■■□□□ 1.07
CTR9Q6PD62 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.73■■□□□ 1.07
CTR9Q6PD62 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTR9Q6PD62 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.73■■□□□ 1.07
CTR9Q6PD62 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTR9Q6PD62 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.73■■□□□ 1.07
CTR9Q6PD62 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CTR9Q6PD62 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTR9Q6PD62 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTR9Q6PD62 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTR9Q6PD62 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CTR9Q6PD62 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTR9Q6PD62 AC093503.3-201ENST00000624917 2352 ntBASIC21.73■■□□□ 1.07
CTR9Q6PD62 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTR9Q6PD62 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTR9Q6PD62 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTR9Q6PD62 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTR9Q6PD62 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTR9Q6PD62 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.72■■□□□ 1.07
CTR9Q6PD62 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.72■■□□□ 1.07
CTR9Q6PD62 TNXA-203ENST00000507684 2038 ntBASIC21.72■■□□□ 1.07
CTR9Q6PD62 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTR9Q6PD62 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTR9Q6PD62 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTR9Q6PD62 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTR9Q6PD62 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.72■■□□□ 1.07
CTR9Q6PD62 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.72■■□□□ 1.07
CTR9Q6PD62 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.72■■□□□ 1.07
CTR9Q6PD62 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
CTR9Q6PD62 AP002414.4-201ENST00000589764 1148 ntBASIC21.72■■□□□ 1.07
CTR9Q6PD62 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.72■■□□□ 1.07
CTR9Q6PD62 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTR9Q6PD62 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTR9Q6PD62 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTR9Q6PD62 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTR9Q6PD62 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.72■■□□□ 1.07
CTR9Q6PD62 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CTR9Q6PD62 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.71■■□□□ 1.07
CTR9Q6PD62 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CTR9Q6PD62 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
CTR9Q6PD62 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTR9Q6PD62 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.71■■□□□ 1.07
CTR9Q6PD62 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTR9Q6PD62 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.71■■□□□ 1.07
CTR9Q6PD62 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTR9Q6PD62 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTR9Q6PD62 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTR9Q6PD62 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.71■■□□□ 1.07
CTR9Q6PD62 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms