Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CASC4Q6P4E1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 NOC2LP2-201ENST00000407594 1944 ntBASIC18.74■□□□□ 0.59
CASC4Q6P4E1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 AC068880.1-201ENST00000507289 2297 ntBASIC18.74■□□□□ 0.59
CASC4Q6P4E1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 MIR564-202ENST00000385049 94 ntBASIC18.74■□□□□ 0.59
CASC4Q6P4E1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 AC233702.5-201ENST00000584107 538 ntBASIC18.74■□□□□ 0.59
CASC4Q6P4E1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 REXO1L10P-201ENST00000615707 1290 ntBASIC18.74■□□□□ 0.59
CASC4Q6P4E1 REXO1L12P-201ENST00000622156 912 ntBASIC18.74■□□□□ 0.59
CASC4Q6P4E1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 AC099343.3-201ENST00000605834 2503 ntBASIC18.74■□□□□ 0.59
CASC4Q6P4E1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CASC4Q6P4E1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.73■□□□□ 0.59
CASC4Q6P4E1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CASC4Q6P4E1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 LETM1P2-201ENST00000597330 2178 ntBASIC18.72■□□□□ 0.59
CASC4Q6P4E1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 AC026471.5-201ENST00000615068 467 ntBASIC18.72■□□□□ 0.59
CASC4Q6P4E1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 ESPNP-201ENST00000270691 2015 ntBASIC18.72■□□□□ 0.59
CASC4Q6P4E1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.72■□□□□ 0.59
CASC4Q6P4E1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms