Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.24■□□□□ 0.67
RNF43Q68DV7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 AC005332.1-201ENST00000577698 1310 ntBASIC19.24■□□□□ 0.67
RNF43Q68DV7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF43Q68DV7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF43Q68DV7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF43Q68DV7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF43Q68DV7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
RNF43Q68DV7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RNF43Q68DV7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF43Q68DV7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RNF43Q68DV7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF43Q68DV7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF43Q68DV7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF43Q68DV7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 AC116407.4-201ENST00000623319 1061 ntBASIC19.23■□□□□ 0.67
RNF43Q68DV7 AC068587.9-201ENST00000641814 219 ntBASIC19.23■□□□□ 0.67
RNF43Q68DV7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RNF43Q68DV7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF43Q68DV7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF43Q68DV7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF43Q68DV7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF43Q68DV7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF43Q68DV7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF43Q68DV7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF43Q68DV7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF43Q68DV7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RNF43Q68DV7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
RNF43Q68DV7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF43Q68DV7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF43Q68DV7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF43Q68DV7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RNF43Q68DV7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF43Q68DV7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF43Q68DV7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF43Q68DV7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF43Q68DV7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF43Q68DV7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF43Q68DV7 SEC1P-202ENST00000473944 940 ntBASIC19.22■□□□□ 0.67
RNF43Q68DV7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RNF43Q68DV7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF43Q68DV7 HOXB1-202ENST00000577092 1414 ntBASIC19.22■□□□□ 0.67
RNF43Q68DV7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms