Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 GCSHP2-201ENST00000560971 527 ntBASIC21.83■■□□□ 1.09
CREB3L3Q68CJ9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CREB3L3Q68CJ9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CREB3L3Q68CJ9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.83■■□□□ 1.09
CREB3L3Q68CJ9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CREB3L3Q68CJ9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CREB3L3Q68CJ9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.83■■□□□ 1.08
CREB3L3Q68CJ9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.83■■□□□ 1.08
CREB3L3Q68CJ9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 AC211429.1-201ENST00000415277 523 ntBASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 AL023973.1-201ENST00000624619 620 ntBASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 AL157888.1-201ENST00000631930 593 ntBASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 NOC2LP2-201ENST00000407594 1944 ntBASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CREB3L3Q68CJ9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 AC113347.1-201ENST00000413321 391 ntBASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3L3Q68CJ9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 AC073508.3-201ENST00000619697 1419 ntBASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 TERF1P1-201ENST00000311003 1181 ntBASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 AP000523.1-201ENST00000398242 1049 ntBASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 AC005363.2-201ENST00000618631 242 ntBASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 AC092865.7-201ENST00000641832 219 ntBASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 AC138028.4-201ENST00000564984 1845 ntBASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3L3Q68CJ9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 LIN28AP1-201ENST00000429574 405 ntBASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms