Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TTC39BQ5VTQ0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TTC39BQ5VTQ0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 ARMC10P1-201ENST00000313754 855 ntBASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 RASA4DP-201ENST00000460726 1199 ntBASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 AC087388.1-201ENST00000571370 1112 ntBASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 MIR3917-201ENST00000580971 93 ntBASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 AC018470.1-201ENST00000624790 3129 ntBASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TTC39BQ5VTQ0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 AC010240.3-201ENST00000607688 395 ntBASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.1■□□□□ 0.65
TTC39BQ5VTQ0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms